Search results

long time no result , and big running memory usage?

Status: Open.

#460 In DaehwanKimLab/hisat2;

· nianxt opened on Aug 7, 2025

HISAT2 missed reads which can be aligned to genome

Status: Open.

#459 In DaehwanKimLab/hisat2;

· santataRU opened on Jul 9, 2025

max-intronlen controls "concordant pair" alignment flags - that should not be the case

Status: Open.

#458 In DaehwanKimLab/hisat2;

· therealgenna opened on Jul 8, 2025

error running hisat2-align-s Error reading _rstarts[] array: 7876, 7896

Status: Open.

#457 In DaehwanKimLab/hisat2;

· jazberna1 opened on Jul 2, 2025

Error during index built

Status: Open.

#456 In DaehwanKimLab/hisat2;

· desmodus1984 opened on Jun 26, 2025

memory usage hisat2-align died with signal 9 (KILL)

Status: Open.

#455 In DaehwanKimLab/hisat2;

· murheisa opened on Jun 14, 2025

Errors when chromosome length is >2G

Status: Open.

#454 In DaehwanKimLab/hisat2;

· xiekunwhy opened on Jun 4, 2025

Long time no results！

Status: Open.

#453 In DaehwanKimLab/hisat2;

· zhangwenda0518 opened on May 14, 2025

Piping reads from stdin fails for hisat2 alignment

Status: Open.

#451 In DaehwanKimLab/hisat2;

· sterrettJD opened on Apr 18, 2025

very large memory usage

Status: Open.

#450 In DaehwanKimLab/hisat2;

· diekhans opened on Apr 3, 2025

un-conc output fail

Status: Open.

#449 In DaehwanKimLab/hisat2;

· RafaellaFerraz opened on Mar 17, 2025

hisat-3n-table

Status: Open.

#448 In DaehwanKimLab/hisat2;

· wingrew opened on Jan 20, 2025