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bugSomething isn't workingSomething isn't workingimpact mediumProductivity partially degraded (not easily mitigated bug) or improved (enhancement)Productivity partially degraded (not easily mitigated bug) or improved (enhancement)likelihood mediumNeither low nor high likelihoodNeither low nor high likelihood
Description
Describe the bug
I was running the regression suite on Windows , noticed crashes with xrayimage query.
I extracted enough code from the test file to run just one of the tests failing.
The issue comes up when a full-path is specified for the XRayImage query's output.
Here's the script: (TestingStuff.py contains methods to handle test-specific methods like Test
and silo_data_path
)
Source("TestingStuff.py")
def calc_midpoints(arr):
midpts = []
for i in range(0, len(arr) - 1):
midpts.append((arr[i] + arr[i + 1]) / 2)
return midpts
OpenDatabase(silo_data_path("curv3d.silo"))
DefineScalarExpression("d1", 'd')
DefineScalarExpression("p1", 'p')
DefineScalarExpression("d2", 'd * 6')
DefineScalarExpression("p2", 'p * 6')
DefineScalarExpression("d3", 'd * 3')
DefineScalarExpression("p3", 'p * 3')
DefineArrayExpression("darr", "array_compose(d1,d2,d3)")
DefineArrayExpression("parr", "array_compose(p1,p2,d3)")
AddPlot("Pseudocolor", "d")
DrawPlots()
# common place for args
divide_emis_by_absorb = 1
origin = (0.0, 2.5, 10.0)
theta = 0
phi = 0
width = 15
height = 10
image_size = (300, 200)
energy_group_bounds = [0, 2, 6, 8]
fake_energy_group_bounds = [0, 1, 2, 3]
energy_group_midpts = calc_midpoints(energy_group_bounds)
fake_energy_group_midpts = calc_midpoints(fake_energy_group_bounds)
calltype = "legacy"
output_type="hdf5"
# This outdir works
#outdir="."
# This outdir does not work
outdir="C:\\A_VisIt\\Run"
Query("XRay Image",
output_type,
outdir,
divide_emis_by_absorb,
origin[0],
origin[1],
origin[2],
theta,
phi,
width,
height,
image_size[0],
image_size[1],
("darr", "parr"),
energy_group_bounds)
DeleteAllPlots()
DeleteExpression("d1")
DeleteExpression("p1")
DeleteExpression("d2")
DeleteExpression("p2")
DeleteExpression("d3")
DeleteExpression("p3")
DeleteExpression("darr")
DeleteExpression("parr")
CloseDatabase(silo_data_path("curv3d.silo"))
conduit_db = pjoin(outdir, "output.root")
OpenDatabase(conduit_db)
AddPlot("Pseudocolor", "mesh_image_topo/intensities")
DrawPlots()
Test("_image_topo_intensities_" + calltype)
Here is the relevant output from engine log when the query's output dir is: "C:\A_VisIt\Run"
Notice there is an extra Run
in the path.
GetMesh: mesh_image_topo [domain 0]
ReadBlueprintMesh: mesh_image_topo [domain 0]
mesh name: mesh
topo name: image_topo
coordset path mesh/coordsets/image_coords
GenerateTreePath using partition map for mesh: mesh
GenerateFilePath using partition map for mesh: mesh
tree cache read [domain 0] C:\A_VisIt\Run\Run/output.root:/mesh/coordsets/image_coords
[blueprint plugin error] HDF5 Error code-1 Error opening HDF5 file for reading: C:\A_VisIt\Run\Run/output.root
Exception: (InvalidVariableException) C:\A_VisIt\visit\src\databases\Blueprint\avtBlueprintTreeCache.C, line 166: An invalid variable (HDF5 Error code-1 Error opening HDF5 file for reading: C:\A_VisIt\Run\Run/output.root
) was specified.
[blueprint warning] failed to load conduit coordset for mesh_image_topo [domain 0] -- skipping mesh for this domainMesh returned by file format is NULL for domain 0, material = _all
Attachments
Here's the generated output.root in case it is helpful.
Desktop
- OS and version: Windows 11
- VisIt Version: develop
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bugSomething isn't workingSomething isn't workingimpact mediumProductivity partially degraded (not easily mitigated bug) or improved (enhancement)Productivity partially degraded (not easily mitigated bug) or improved (enhancement)likelihood mediumNeither low nor high likelihoodNeither low nor high likelihood